The motivation of this work is that BioFVM (http://BioFVM.MathCancer.org) supports only on-node shared memory parallelism using OpenMP. We have developed BioFVM_X as it adds MPI to BioFVM to parallelize the core kernels of BioFVM using MPI. Some core kernels are: Domain Partitioning, Basic Agent Generation, Gaussian Profile building, File Writing, Direct Solver (Thomas' algorithm). Most of the MPI-based parallel functions are made available in BioFVM_parallel.cpp.
![](https://www.bsc.es/sites/default/files/public/styles/bscw2_-_simple_crop_style/public/bscw2/content/software-app/logo/biofvm.png?itok=O2t06tyw&sc=4cdac06ea8c7c20b3c2d55ba223abc02)
Contact:
License:
BSD 3-Clause License
Primary tabs
BSD License (Version 3.0) (Latest Version)
Link below to download BioFVM
Release Notes