Genome Informatics

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Showing 1 - 8 results of 8

2022

Methods in Molecular BiologyVariant CallingAnnotating Cancer-Related Variants at Protein–Protein Interface with Structure-PPi

M. Vazquez, and T. Pons

2021

Longitudinal whole-exome sequencing of cell-free DNA for tracking the co-evolutionary tumor and immune evasion dynamics: longitudinal data from a single patient

Annals of Oncology

R.K.. Hastings, M.R.. Openshaw, M.. Vázquez, A.B.. Moreno-Cardenas, D.. Fernandez-Garcia, L.. Martinson, K.. Kulbicki, L.. Primrose, D.S.. Guttery, K.. Page, B.. Toghill, C.. Richards, A.. Thomas, J.. Tabernero, R.C.. Coombes, S.. Ahmed, R.A.. Toledo, and J.A.. Shaw
Immune analysis of lymph nodes in relation to the presence or absence of tumor infiltrating lymphocytes in triple-negative breast cancer

European Journal of Cancer

Á. Quintana, V. Peg, A. Prat, T. Moliné, G. Villacampa, L. Paré, P. Galván, R. Dientsmann, P. Schmid, G. Curigliano, E. Muñoz-Couselo, J. Perez-García, M. Marti, J. Blanco-Heredia, C. dos Anjos, M. Vazquez, L. De Mattos-Arruda, and J. Cortés

2020

Butler enables rapid cloud-based analysis of thousands of human genomesAbstract

Nature Biotechnology

S. Yakneen, S. M. Waszak, M. Gertz, and J. O. Korbel
Sex differences in oncogenic mutational processes

Nature Communications

C. H. Li, S. D. Prokopec, R. X. Sun, F. Yousif, N. Schmitz, P. C. Boutros, and
Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples

Nature Communications

M. H. Bailey, W. U. Meyerson, L. Jonathan Dursi, L-B. Wang, G. Dong, W-W. Liang, A. Weerasinghe, S. Li, Y. Li, S. Kelso, G. Saksena, K. Ellrott, M. C. Wendl, D. A. Wheeler, G. Getz, J. T. Simpson, M. B. Gerstein, and L. Ding
Pan-cancer analysis of whole genomes

Nature

2019

Patient Dossier: Healthcare queries over distributed resources

PLoS computational biology

M. Vázquez, and A. Valencia