Publications

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2012

MDWeb and MDMoby: an integrated web-based platform for molecular dynamics simulations.

Bioinformatics (Oxford, England)

A. Hospital, P. Andrio, C. Fenollosa, D. Cicin-Sain, M. Orozco, and J L. Gelpí
Risk variants for psoriasis vulgaris in a large case-control collection and association with clinical subphenotypes.

Human molecular genetics

A. Julià, R. Tortosa, J M. Hernanz, J. D. Cañete, E. Fonseca, C. Ferrándiz, P. Unamuno, L. Puig, J L. Fernández-Sueiro, R. Sanmartí, J. Rodríguez, J. Gratacós, E. Dauden, J L. Sánchez-Carazo, J L. López-Estebaranz, D. Moreno-Ramírez, R. Queiró, C. Montilla, J C. Torre-Alonso, J J. Pérez-Venegas, F. Vanaclocha, E. Herrera, S. Muñoz-Fernández, C. González, D. Roig, A. Erra, I. Acosta, A. Fernández-Nebro, P. Zarco, A. Alonso, M. López-Lasanta, A. García-Montero, J L. Gelpí, D. Absher, and S. Marsal
Unveiling case-control relationships in designing a simple and powerful method for detecting gene-gene interactions.

Genetic epidemiology

O. Canela-Xandri, A. Julià, J L. Gelpí, and S. Marsal
Epigenomic analysis detects widespread gene-body DNA hypomethylation in chronic lymphocytic leukemia.

Nature genetics

M. Kulis, S. Heath, M. Bibikova, A. C. Queirós, A. Navarro, G. Clot, A. Martínez-Trillos, G. Castellano, I. Brun-Heath, M. Pinyol, S. Barberán-Soler, P. Papasaikas, P. Jares, S. Beà, D. Rico, S. Ecker, M. Rubio, R. Royo, V. Ho, B. Klotzle, L. Hernández, L. Conde, M. López-Guerra, D. Colomer, N. Villamor, M. Aymerich, M. Rozman, M. Bayés, M. Gut, J L. Gelpí, M. Orozco, J-B. Fan, V. Quesada, X. S. Puente, D. G. Pisano, A. Valencia, A. López-Guillermo, I. Gut, C. López-Otín, E. Campo, and J. I. Martín-Subero
Hog1 bypasses stress-mediated down-regulation of transcription by RNA polymerase II redistribution and chromatin remodeling.

Genome biology

M. Nadal-Ribelles, N. Conde, O. Flores, J. González-Vallinas, E. Eyras, M. Orozco, E. de Nadal, and F. Posas
Evidence for transcript networks composed of chimeric RNAs in human cells.

PloS one

S. Djebali, J. Lagarde, P. Kapranov, V. Lacroix, C. Borel, J. M. Mudge, C. Howald, S. Foissac, C. Ucla, J. Chrast, P. Ribeca, D. Martin, R. R. Murray, X. Yang, L. Ghamsari, C. Lin, I. Bell, E. Dumais, J. Drenkow, M. L. Tress, J L. Gelpí, M. Orozco, A. Valencia, N. L. van Berkum, B. R. Lajoie, M. Vidal, J. Stamatoyannopoulos, P. Batut, A. Dobin, J. Harrow, T. Hubbard, J. Dekker, A. Frankish, K. Salehi-Ashtiani, A. Reymond, S. E. Antonarakis, R. Guigó, and T. R. Gingeras
Structure of triplex DNA in the gas phase.

Journal of the American Chemical Society

A. Arcella, G. Portella, M L. Ruiz, R. Eritja, M. Vilaseca, V. Gabelica, and M. Orozco
Characterization of the impact of alternative splicing on protein dynamics: the cases of glutathione S-transferase and ectodysplasin-A isoforms.

Proteins

M. Barbany, J. Morata, T. Meyer, S. Lois, M. Orozco, and X. de la Cruz
Defining the nature of thermal intermediate in 3 state folding proteins: apoflavodoxin, a study case.

PLoS computational biology

R. García-Fandiño, P. Bernadó, S. Ayuso-Tejedor, J. Sancho, and M. Orozco
Exploring polymorphisms in B-DNA helical conformations.

Nucleic acids research

P. D. Dans, A. Pérez, I. Faustino, R. Lavery, and M. Orozco

Pages