Publications

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2014

Unraveling the sequence-dependent polymorphic behavior of d(CpG) steps in B-DNA.

Nucleic Acids Res

P. DanielDans, I. Faustino, F. Battistini, K. Zakrzewska, R. Lavery, and M. Orozco
μABC: a systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA.

Nucleic Acids Res

M. Pasi, J. H. Maddocks, D. Beveridge, T. C. Bishop, D. A. Case, T. Cheatham, P. D. Dans, B. Jayaram, F. Lankaš, C. Laughton, J. Mitchell, R. Osman, M. Orozco, A. Pérez, D. Petkevičiūtė, N. Spackova, J. Sponer, K. Zakrzewska, and R. Lavery
High Throughput Computational Studies of Macromolecular Structure Flexibility

A. Hospital, J L. Gelpí, and M. Orozco
Discrete Molecular Dynamics

Computational Approaches to Protein Dynamics: From Quantum to Coarse-Grained Methods

P. Sfriso, A. Emperador, J L. Gelpí, and M. Orozco
Using HPC Software Frameworks for Developing BSIT: A Geophysical Imaging Tool

Proceedings of WCCM XI, ECCM V, ECFD VI

M. Hanzich, J E. Rodriguez, N. Gutierrez, J. de la Puente, and J M.. Cela
High level queuing architecture model for high-end processors

D. Roca, M. Nemirovsky, M. Moreto, and M. Casas
Performance Analysis of the Memory Management Unit under Scale-out Workloads

V. Karakostas, O. Unsal, M. Nemirovsky, A. Cristal, and M. Swift
On the Area and Energy Scalability of Wireless Network-on-Chip: A Model-Based Benchmarked Design Space Exploration

IEEE /ACM Transactions on Networking

S. Abadal, M. Iannazzo, M. Nemirovsky, A. Cabellos-Aparicio, H. Lee, and E. Alarcón
Key ingredients in an IoT recipe: Fog Computing, Cloud computing, and more Fog Computing

Computer Aided Modeling and Design of Communication Links and Networks (CAMAD), 2014 IEEE 19th International Workshop on

M. Yannuzzi, R. Milito, R. Serral-Gracia, D. Montero, and M. Nemirovsky
On the Roles of the Programmer, the Compiler and the Runtime System When Programming Accelerators in OpenMP

Using and Improving OpenMP for Devices, Tasks, and More. IWOMP 2014. Lecture Notes in Computer Science

G. Ozen, E. Ayguade, and J. Labarta

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