Publications

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2020

Using Arm’s scalable vector extension on stencil codes

The Journal of Supercomputing

A. Armejach, H. Caminal, J. M. Cebrián, R. Langarita, R. González-Alberquilla, C. Adeniyi-Jones, M. Valero, M. Casas, and M. Moreto

2019

Reconstructing complex lineage trees from scRNA-seq data using MERLoTAbstract

Nucleic Acids Research

G. R. Parra, N. Papadopoulos, L. Ahumada-Arranz, J. El Kholtei, N. Mottelson, Y. Horokhovsky, B. Treutlein, and J. Soeding
Local frustration around enzyme active sitesSignificance

Proceedings of the National Academy of Sciences

M. I. Freiberger, B. A. Guzovsky, P. G. Wolynes, G. R. Parra, and D. U. Ferreiro
PROSSTT: probabilistic simulation of single-cell RNA-seq data for complex differentiation processesAbstractSummaryAvailability and implementationSupplementary information

Bioinformatics

N. Papadopoulos, P. R. Gonzalo, and J. Söding
Quantum Observables for continuous control of the Quantum Approximate Optimization Algorithm via Reinforcement Learning

A. García-Sáez, and J. Riu
The Clinical Genome and Ancestry Report (CGAR): An Interactive Web Application for Prioritizing Clinically-implicated Variants from Genome Sequencing Data with Ancestry Composition

IH. Lee, JA. Negron, C. Hernandez-Ferrer, WJ. Alvarez, KD. Mandl, and SW. Kong
Dose and time effects of solar simulated ultraviolet radiation on the in vivo human skin transcriptome

M. Bustamante, C. Hernandez-Ferrer, A. Tewari, Y. Sarria, GI. Harrison, E. Puigdecanet, L. Nonell, W. Kang, MR. Friedländer, X. Estivil, JR. González, M. Nieuwenhuijsen, and A. Young
Early-Life Environmental Exposures and Blood Pressure in Children

C. Warembourg, L. Maitre, I. Tamayo-Uria, S. Fossati, T. Roumeliotaki, GM. Aasvang, S. Andrušaitytė, M. Casas, E. Cequier, L. Chatzi, A. Dedele, JR. González, R. Grazulevicien, LS. Haug, C. Hernandez-Ferrer, B. Heude, M. Karachaliou, NH. Krog, R. McEachan, M. Nieuwenhuijsen, I. Petraviciene, J. Quentin, O. Robinson, AK. Sakhi, R. Slama, C. Thomsen, J. Urquiza, M. Vafeiadi, J. West, J. Wright, M. Vrijheid, and X. Basagaña
Comprehensive study of the exposome and omic data using rexposome Bioconductor packages

C. Hernandez-Ferrer, GA. Wellenius, I. Tamayo, X. Basagaña, J. Sunyer, M. Vrijheid, and JR. González
Prenatal Particulate Air Pollution and DNA Methylation in Newborns: An Epigenome-Wide Meta-Analysis

O. Gruzieva, CH. Xu, P. Yousefi, C. Relton, SK. Merid, CV. Breton, L. Gao, HE. Volk, JI. Feinberg, C. Ladd-Acosta, K. Bakulski, C. Auffray, N. Lemonnier, M. Plusquin, A. Ghantous, Z. Herceg, TS. Nawrot, C. Pizzi, L. Richiardi, F. Rusconi, P. Vineis, M. Kogevinas, JF. Felix, L. Duijts, HT. den Dekker, VWV. Jaddoe, JL. Ruiz, M. Bustamante, JM. Antó, J. Sunyer, M. Vrijheid, KB. Gützkow, R. Grazuleviciene, C. Hernandez-Ferrer, I. Annesi-Maesano, J. Johanna, J. Bousquet, A. Bergström, I. Kull, C. Söderhäll, J. Kere, U. Gehring, B. Brunekreef, AC. Just, RJ. Wright, C. Peng, RD. Gold, I. Kloog, DL. DeMeo, G. Pershagen, GH. Koppelman, SJ. London, AA. Baccarelli, and E. Melén

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