Researcher for Serverless applied to Genomics and Healthcare (R2)

Job Reference

412_24_CS_DCC_R2

Position

Researcher for Serverless applied to Genomics and Healthcare (R2)

Closing Date

Tuesday, 16 July, 2024
Reference: 412_24_CS_DCC_R2
Job title: Researcher for Serverless applied to Genomics and Healthcare (R2)

About BSC

The Barcelona Supercomputing Center - Centro Nacional de Supercomputación (BSC-CNS) is the leading supercomputing center in Spain. It houses MareNostrum, one of the most powerful supercomputers in Europe, was a founding and hosting member of the former European HPC infrastructure PRACE (Partnership for Advanced Computing in Europe), and is now hosting entity for EuroHPC JU, the Joint Undertaking that leads large-scale investments and HPC provision in Europe. The mission of BSC is to research, develop and manage information technologies in order to facilitate scientific progress. BSC combines HPC service provision and R&D into both computer and computational science (life, earth and engineering sciences) under one roof, and currently has over 1000 staff from 60 countries.

Look at the BSC experience:
BSC-CNS YouTube Channel
Let's stay connected with BSC Folks!

We are particularly interested for this role in the strengths and lived experiences of women and underrepresented groups to help us avoid perpetuating biases and oversights in science and IT research. In instances of equal merit, the incorporation of the under-represented sex will be favoured.

Context And Mission

The Data-Centric Computing group from the Computer Science department at the
Barcelona Supercomputing Center is searching for a researcher to work on extreme-data healthcare pipelines applied to the edge/cloud computing.

The main objective is to contribute in one European research project. The focus is on making optimizations to current genomics use-cases in order to enhance their capabilities. The goal would foucs on leveraging state-of-the-art serverless strategies to improve the overall system. The application is run in Big
Data and Serverless frameworks such as Apache Spark or Lithops. This work is performed in collaboration
with Genomic researchers as the applications are focused on genomics analytics.
The project involves collaborating with researchers both from BSC and external
and actual use cases. This includes communicating research results in project
meetings with the rest of the partners online and presential (might require
to travel outside of Spain twice a year).

Key Duties

  • Optimize data pipelines for the cloud and HPC systems
  • Development and integration of Synthetic Data Generation models for healthcare
    data
  • Usage and metric extraction of Cloud/Serverles HPDA/ML platforms and
    applications (e.g., Apache Spark, Kubernetes,...)
  • Participation in internal and external meetings
  • Give mutual support to other workers in the projects

Requirements

  • Education
    • PhD in Computer Science with at least 1 year of experience after completion
  • Essential Knowledge and Professional Experience
    • Skills on Software Engineering
    • Deep knowledge on infrastructure and especially on serverless computing paradigm
    • Knowledge of Python
    • Knoweldge on storage systems and strategies for the cloud/edge
  • Additional Knowledge and Professional Experience
    • Knowledge in HPC systems
  • Competences
    • Basic skills on system administration
    • Basic skills in using distributed environments and databases

Conditions

  • The position will be located at BSC within the Computer Sciences Department
  • We offer a full-time contract (37.5h/week), a good working environment, a highly stimulating environment with state-of-the-art infrastructure, flexible working hours, extensive training plan, restaurant tickets, private health insurance, support to the relocation procedures
  • Duration: Open-ended contract due to technical and scientific activities linked to the project and budget duration
  • Holidays: 23 paid vacation days plus 24th and 31st of December per our collective agreement
  • Salary: we offer a competitive salary commensurate with the qualifications and experience of the candidate and according to the cost of living in Barcelona
  • Starting date: 01/10/2024

Applications procedure and process

All applications must be made through BSC website and contain:

  • A full CV in English including contact details
  • A Cover Letter with a statement of interest in English, including two contacts for further references - Applications without this document will not be considered

    In accordance with the OTM-R principles, a gender-balanced recruitment panel is formed for every vacancy at the beginning of the process. After reviewing the content of the applications, the panel will start the interviews, with at least one technical and one administrative interview. A profile questionnaire as well as a technical exercise may be required during the process.

    The panel will make a final decision and all candidates who had contacts with them will receive a feedback with details on the acceptance or rejection of their profile.

    At BSC we are seeking continuous improvement in our recruitment processes, for any suggestions or feedback/complaints about our Recruitment Processes, please contact recruitment [at] bsc [dot] es.

    For more information follow this link

  • Deadline

    The vacancy will remain open until a suitable candidate has been hired. Applications will be regularly reviewed and potential candidates will be contacted.

    OTM-R principles for selection processes

    BSC-CNS is committed to the principles of the Code of Conduct for the Recruitment of Researchers of the European Commission and the Open, Transparent and Merit-based Recruitment principles (OTM-R). This is applied for any potential candidate in all our processes, for example by creating gender-balanced recruitment panels and recognizing career breaks etc.
    BSC-CNS is an equal opportunity employer committed to diversity and inclusion. We are pleased to consider all qualified applicants for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, age, disability or any other basis protected by applicable state or local law.
    For more information follow this link

    Application Form

    please choose one of this and if needed describe the option : - BSC Website - Euraxess - Spotify - HiPeac - LinkedIn - Networking/Referral: include who and how - Events (Forum, career fairs): include who and how - Through University: include the university name - Specialized website (Metjobs, BIB, other): include which one - Other social Networks: (Twitter, Facebook, Instagram, Youtube): include which one - Other (Glassdoor, ResearchGate, job search website and other cases): include which one
    Please, upload your CV document using the following name structure: Name_Surname_CV
    Files must be less than 3 MB.
    Allowed file types: txt rtf pdf doc docx.
    Please, upload your CV document using the following name structure: Name_Surname_CoverLetter
    Files must be less than 3 MB.
    Allowed file types: txt rtf pdf doc docx zip.
    Please, upload your CV document using the following name structure: Name_Surname_OtherDocument
    Files must be less than 10 MB.
    Allowed file types: txt rtf pdf doc docx rar tar zip.
    ** Consider that the information provided in relation to gender and nationality will be used solely for statistical purposes.