Miguel Romero

2023

• Local energetic frustration conservation in protein families and superfamilies

  Nature Communications

  M. I. Freiberger, V. Ruiz-Serra, C. Pontes, M. Romero-Durana, P. Galaz-Davison, C. A. Ramírez-Sarmiento, C. D. Schuster, M. A. Marti, P. G. Wolynes, D. U. Ferreiro, G. R. Parra, and A. Valencia

2022

• Heterogeneous Infectivity and Pathogenesis of SARS-CoV-2 Variants Beta, Delta and Omicron in Transgenic K18-hACE2 and Wildtype Mice

  Frontiers in Microbiology

  F. Tarrés-Freixas, B. Trinité, A. Pons-Grífols, M. Romero-Durana, E. Riveira-Muñoz, C. Ávila-Nieto, M. Pérez, E. Garcia-Vidal, D. Perez-Zsolt, J. Muñoz-Basagoiti, D. Raïch-Regué, N. Izquierdo-Useros, C. Andrés, A. Antón, T. Pumarola, I. Blanco, M. Noguera-Julian, V. Guallar, R. Lepore, A. Valencia, V. Urrea, J. Vergara-Alert, B. Clotet, E. Ballana, J. Carrillo, J. Segalés, and J. Blanco

2019

• Blind prediction of homo‐ and hetero‐protein complexes: The CASP13‐CAPRI experiment

  Proteins: Structure, Function, and Bioinformatics

  M. F. Lensink, G. Brysbaert, N. Nadzirin, S. Velankar, R. A. G. Chaleil, T. Gerguri, P. A. Bates, E. Laine, A. Carbone, S. Grudinin, et al.

2017

• LightDock: a new multi-scale approach to protein–protein docking

  Bioinformatics

  B. Jiménez-García, J. Roel-Touris, M. Romero-Durana, M. Vidal, D. Jiménez-González, and J. Fernández-Recio

2016

• Modeling Binding Affinity of Pathological Mutations for Computational Protein Design

  Computational Protein Design

  M. Romero-Durana, C. Pallara, F. Glaser, and J. Fernandez-Recio
• Modeling Binding Affinity of Pathological Mutations for Computational Protein Design

  Computational Protein Design

  M. Romero-Durana, C. Pallara, F. Glaser, and J. Fernandez-Recio
• Prediction of homoprotein and heteroprotein complexes by protein docking and template-based modeling: A CASP-CAPRI experiment

  Proteins: Structure, Function, and Bioinformatics

  M. F. Lensink, S. Velankar, A. Kryshtafovych, S-Y. Huang, D. Schneidman-Duhovny, A. Sali, J. Segura, N. Fernandez-Fuentes, S. Viswanath, R. Elber, et al.

2014

• Structure and energetics of protein-RNA interactions: new insights from docking predictions.

  XIV Congress of the Spanish Biophysical Society. Alcalá de Henares (Spain).

  L.. Pérez-Cano, M. Romero-Durana, and J. Fernández-Recio

2013

• Expanding the frontiers of protein-protein modeling: from docking and scoring to binding affinity predictions and other challenges.

  Proteins

  C. Pallara, B. Jiménez-García, L. Pérez-Cano, M. Romero-Durana, A. Solernou, S. Grosdidier, C. Pons, I. H. Moal, and J. Fernández-Recio
• Community-wide evaluation of methods for predicting the effect of mutations on protein-protein interactions.

  Proteins

  R. Moretti, S. J. Fleishman, R. Agius, M. Torchala, P. A. Bates, P. L. Kastritis, J. P. G. L. M. Rodrigues, M. Trellet, A. M. J. J. Bonvin, M. Cui, M. Rooman, D. Gillis, Y. Dehouck, I. Moal, M. Romero-Durana, L. Pérez-Cano, C. Pallara, B. Jimenez, J. Fernández-Recio, S. Flores, M. Pacella, K. Praneeth Kilambi, J. J. Gray, P. Popov, S. Grudinin, J. Esquivel-Rodríguez, D. Kihara, N. Zhao, D. Korkin, X. Zhu, O. N. A. Demerdash, J. C. Mitchell, E. Kanamori, Y. Tsuchiya, H. Nakamura, H. Lee, H. Park, C. Seok, J. Sarmiento, S. Liang, S. Teraguchi, D. M. Standley, H. Shimoyama, G. Terashi, M. Takeda-Shitaka, M. Iwadate, H. Umeyama, D. Beglov, D. R. Hall, D. Kozakov, S. Vajda, B. G. Pierce, H. Hwang, T. Vreven, Z. Weng, Y. Huang, H. Li, X. Yang, X. Ji, S. Liu, Y. Xiao, M. Zacharias, S. Qin, H-X. Zhou, S-Y. Huang, X. Zou, S. Velankar, J. Janin, S. J. Wodak, and D. Baker