Publications

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2021

Recommendations for the FAIRification of genomic track metadata

F1000Research

S. Gundersen, S. Boddu, S. Capella-Gutierrez, F. Drabløs, J. M. Fernández, R. Kompova, K. Taylor, D. Titov, D. Zerbino, and E. Hovig
Perspectives on automated composition of workflows in the life sciences

F1000Research

A-L. Lamprecht, M. Palmblad, J. Ison, V. Schwämmle, M. Sadnan Al Manir, I. Altintas, C. J. O. Baker, A. Ben Hadj Amor, S. Capella-Gutierrez, P. Charonyktakis, M. R. Crusoe, Y. Gil, C. Goble, T. J. Griffin, P. Groth, H. Ienasescu, P. Jagtap, M. Kalaš, V. Kasalica, A. Khanteymoori, T. Kuhn, H. Mei, H. Ménager, S. Möller, R. A. Richardson, V. Robert, S. Soiland-Reyes, R. Stevens, S. Szaniszlo, S. Verberne, A. Verhoeven, and K. Wolstencroft
FGFR Inhibition Overcomes Resistance to EGFR-targeted Therapy in Epithelial-like Cutaneous Carcinoma

Clinical Cancer Research

A. Bernat-Peguera, J. Navarro-Ventura, L. Lorenzo-Sanz, V. da Silva-Diz, M. Bosio, L. Palomero, R. M. Penin, D. Pérez Sidelnikova, J. Oriol Bermejo, M. Taberna, N. Vilariño, J. M. Piulats, R. Mesia, J. Maria Viñals, E. Gonzalez-Suarez, S. Capella-Gutierrez, A. Villanueva, F. Viñals, and P. Muñoz
PhylomeDB V5: an expanding repository for genome-wide catalogues of annotated gene phylogenies

Nucleic Acids Research

D. Fuentes, M. Molina, U. Chorostecki, S. Capella-Gutierrez, M. Marcet-Houben, and T. Gabaldón
Perspectives on emerging technologies, personalised medicine, and clinical research for cancer control in Latin America and the Caribbean

The Lancet Oncology

G. Werutsky, C. H. Barrios, A. F. Cardona, A. Albergaria, A. Valencia, C. G. Ferreira, C. Rolfo, E. de Azambuja, G. A. Rabinovich, G. Sposetti, O. Arrieta, R. Dienstmann, T. F. Rebelatto, V. Denninghoff, V. Aran, and E. Cazap
Unraveling the molecular basis of host cell receptor usage in SARS-CoV-2 and other human pathogenic β-CoVs

Computational and Structural Biotechnology Journal

C. Pontes, V. Ruiz-Serra, R. Lepore, and A. Valencia
BioFVM-X: An MPI+OpenMP 3-D Simulator for Biological Systems

G. Saxena, M. Ponce-de-Leon, A. Montagud, D. Vicente Dorca, and A. Valencia
STAG2 loss-of-function affects short-range genomic contacts and modulates the basal-luminal transcriptional program of bladder cancer cells

Nucleic Acids Research

L. Richart, E. Lapi, V. Pancaldi, M. Cuenca-Ardura, E. Carrillo-d Pau, M. Madrid-Mencía, H. Neyret-Kahn, F. Radvanyi, J. Antonio Rodríguez, Y. Cuartero, F. Serra, F. Le Dily, A. Valencia, M. A. Marti-Renom, and F. X. Real
Computational analysis of sense-antisense chimeric transcripts reveals their potential regulatory features and the landscape of expression in human cells

NAR Genomics and Bioinformatics

S. Mukherjee, R. Detroja, D. Balamurali, E. Matveishina, Y. A. Medvedeva, A. Valencia, A. Gorohovski, and M. Frenkel-Morgenstern
Transcriptomic and Genetic Associations between Alzheimer’s Disease, Parkinson’s Disease, and Cancer

Cancers

J. Forés-Martos, C. Boullosa, D. Rodrigo-Domínguez, J. Sánchez-Valle, B. Suay-García, J. Climent, A. Falcó, A. Valencia, J. Anton Puig-Butillé, S. Puig, and R. Tabarés-Seisdedos

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