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2022

Clustering and graph mining techniques for classification of complex structural variations in cancer genomes

Scientific Reports

G. Gomez-Sanchez, L. Delgado-Serrano, D. Carrera, D. Torrents, and J L. Berral
Chromosome-level assembly, annotation and phylome of Pelobates cultripes, the western spadefoot toad

DNA Research

H. ChristophLiedtke, F. Cruz, J. Gómez-Garrido, D. Fuentes Palacios, M. Marcet-Houben, M. Gut, T. Alioto, T. Gabaldón, and I. Gomez-Mestre
Using genomics to understand the mechanisms of virulence and drug resistance in fungal pathogens

Biochemical Society Transactions

M. ÀngelSchikora-Tamarit, and T. Gabaldón
Evolutionary analyses of genes in Echinodermata offer insights towards the origin of metazoan phyla

Genomics

S. Foley, A. Vlasova, M. Marcet-Houben, T. Gabaldón, and V. F. Hinman
Secondary structure prediction of long noncoding RNA: review and experimental comparison of existing approaches

Briefings in Bioinformatics

L. A. Bugnon, A. A. Edera, S. Prochetto, M. Gerard, J. Raad, E. Fenoy, M. Rubiolo, U. Chorostecki, T. Gabaldón, F. Ariel, L. E. Di Persia, D. H. Milone, and G. Stegmayer
Patterns of Genomic Variation in the Opportunistic Pathogen Candida glabrata Suggest the Existence of Mating and a Secondary Association with Humans

Current Biology

L. Carreté, E. Ksiezopolska, C. Pegueroles, E. Gómez-Molero, E. Saus, S. Iraola-Guzmán, D. Loska, O. Bader, C. Fairhead, and T. Gabaldón
Citizen-science reveals changes in the oral microbiome in Spain through age and lifestyle factors

npj Biofilms and Microbiomes

J. R. Willis, E. Saus, S. Iraola-Guzmán, E. Ksiezopolska, L. Cozzuto, L. A. Bejarano, N. Andreu-Somavilla, M. Alloza-Trabado, A. Blanco, A. Puig-Sola, E. Broglio, C. Carolis, J. Ponomarenko, J. Hecht, and T. Gabaldón
Genome analysis of five recently described species of the CUG-Ser clade uncovers Candida theae as a new hybrid lineage with pathogenic potential in the Candida parapsilosis species complex

DNA Research

V. Mixão, V. del Olmo, E. Hegedűsová, E. Saus, L. Pryszcz, A. Cillingová, J. Nosek, and T. Gabaldón
Changes in the stool and oropharyngeal microbiome in obsessive-compulsive disorder

Scientific Reports

L. Domènech, J. Willis, M. Alemany-Navarro, M. Morell, E. Real, G. Escaramis, S. Bertolín, D. Sánchez Chinchilla, S. Balcells, C. Segalàs, X. Estivill, J. M. Menchón, T. Gabaldón, P. Alonso, and R. Rabionet
Candidemia Among Coronavirus Disease 2019 Patients in Turkey Admitted to Intensive Care Units: A Retrospective Multicenter Study

Open Forum Infectious Diseases

A. Arastehfar, N. Ünal, T. Hoşbul, M. Alper Özarslan, A. Sultan Karakoyun, F. Polat, D. Fuentes, R. Gümral, T. Turunç, F. Daneshnia, D. S. Perlin, C. Lass-Florl, T. Gabaldón, M. Ilkit, and H. M Nguyen

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