Publications

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2021

Recommendations for the FAIRification of genomic track metadata

F1000Research

S. Gundersen, S. Boddu, S. Capella-Gutierrez, F. Drabløs, J. M. Fernández, R. Kompova, K. Taylor, D. Titov, D. Zerbino, and E. Hovig
A roadmap for the generation of benchmarking resources for antimicrobial resistance detection using next generation sequencing

F1000Research

M. Petrillo, M. Fabbri, D. Maria Kagkli, M. Querci, G. Van den Eede, E. Alm, D. Aytan-Aktug, S. Capella-Gutierrez, C. Carrillo, A. Cestaro, K-G. Chan, T. Coque, C. Endrullat, I. Gut, P. Hammer, G. L. Kay, J-Y. Madec, A. E. Mather, A. Carolyn McHardy, T. Naas, V. Paracchini, S. Peter, A. Pightling, B. Raffael, J. Rossen, E. Ruppé, R. Schlaberg, K. Vanneste, L. M. Weber, H. Westh, and A. Angers-Loustau
ELIXIR‐EXCELERATE: establishing Europe's data infrastructure for the life science research of the future

The EMBO Journal

J. Harrow, J. Hancock, N. Blomberg, N. Blomberg, S. Brunak, S. Capella-Gutierrez, C. Durinx, C. T. Evelo, C. Goble, I. Gut, J. Ison, T. Keane, B. Leskošek, L. Matyska, J. McEntyre, C. Miguel, A. Navarro, S. Newhouse, T. Nyrönen, P. Palagi, B. Persson, C. Pommier, J. Rambla, M. Roos, G. Rustici, A. Smith, A. Valencia, C. van Gelder, J. Vondrášek, N. Peder Willassen, J. Arenas, H. Parkinson, R. D. Finn, S. Beltran, L. Matalonga, H. Hurst, P. Kersey, I. Lappalainen, P. Kahlem, G. Saunders, S. Sarntivijai, R. Drysdale, J. Tedds, J. Lanfear, and J. Harrow
Lecture Notes in Computer ScienceAdvances in Information RetrievalBioASQ at CLEF2021: Large-Scale Biomedical Semantic Indexing and Question Answering

A. Krithara, A. Nentidis, G. Paliouras, M. Krallinger, and A. Miranda
Impact of Transcriptome and Gut Microbiome on the Response of HIV-1 Infected Individuals to a Dendritic Cell-Based HIV Therapeutic Vaccine

Vaccines

R. Pastor-Ibáñez, F. Díez-Fuertes, S. Sánchez-Palomino, J. Alcamí, M. Plana, D. Torrents, L. Leal, and F. García
TIGER: The gene expression regulatory variation landscape of human pancreatic islets

Cell Reports

L. Alonso, A. Piron, I. Moran, M. Guindo-Martínez, S. Bonàs-Guarch, G. Atla, I. Miguel-Escalada, R. Royo, M. Puiggròs, X. Garcia-Hurtado, M. Suleiman, L. Marselli, J. L. S. Esguerra, J-V. Turatsinze, J. M. Torres, V. Nylander, J. Chen, L. Eliasson, M. Defrance, R. Amela, H. Mulder, A. L. Gloyn, L. Groop, P. Marchetti, D. L. Eizirik, J. Ferrer, J. M. Mercader, M. Cnop, and D. Torrents
Germline genetic contribution to the immune landscape of cancer

Immunity

R. W. Sayaman, M. Saad, V. Thorsson, D. Hu, W. Hendrickx, J. Roelands, E. Porta-Pardo, Y. Mokrab, F. Farshidfar, T. Kirchhoff, R. F. Sweis, O. F. Bathe, C. Heimann, M. J. Campbell, C. Stretch, S. Huntsman, R. E. Graff, N. Syed, L. Radvanyi, S. Shelley, D. Wolf, F. M. Marincola, M. Ceccarelli, J. Galon, E. Ziv, and D. Bedognetti
A catalogue of 863 Rett-syndrome-causing MECP2 mutations and lessons learned from data integration

Scientific Data

F. Ehrhart, A. Jacobsen, M. Rigau, M. Bosio, R. Kaliyaperumal, J. F. J. Laros, E. L. Willighagen, A. Valencia, M. Roos, S. Capella-Gutierrez, L. M. G. Curfs, and C. T. Evelo
Large eddy simulation of cough jet dynamics, droplet transport, and inhalability over a ten minute exposure

physics of fluids

H. Calmet, K. Inthavong, A. Both, D. Mira, A. surapaneni, B. Egukitza, and G. Houzeaux
Large eddy simulation of cough jet dynamics, droplet transport, and inhalability over a ten minute exposure.

physics of fluids

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