Publications

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2022

Validating NEUTRO, a deterministic finite element neutron transport solver for fusion applications, with literature tests, experimental benchmarks and other neutronic codes

Plasma Physics and Controlled Fusion

E. Goldberg, M. Circuns i Duxans, O. Ortega Gelabert, M. J. Mantsinen, and A. Soba
ExTRI: Extraction of transcription regulation interactions from literature

Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms

M. Vazquez, M. Krallinger, F. Leitner, M. Kuiper, A. Valencia, and A. Laegreid
Lecture Notes in Computer ScienceAdvances in Information RetrievalBioASQ at CLEF2022: The Tenth Edition of the Large-scale Biomedical Semantic Indexing and Question Answering Challenge

A. Nentidis, A. Krithara, G. Paliouras, L. Gasco, and M. Krallinger
Detection of oncogenic and clinically actionable mutations in cancer genomes critically depends on variant calling tools

Bioinformatics

C. A. Garcia-Prieto, F. Martínez-Jiménez, A. Valencia, and E. Porta-Pardo
The structural coverage of the human proteome before and after AlphaFold

PLoS computational biology

E. Porta-Pardo, V. Ruiz-Serra, S. Valentini, and A. Valencia
Tailored meshing for parallel 3D electromagnetic modeling using high-order edge elements

Journal of Computational Science

O. Castillo-Reyes, A. Amor-Martin, A. Botella, P. Anquez, and L. E. García-Castillo
TunaOil: A Tuning Algorithm Strategy for Reservoir Simulation Workloads

Journal of Computational Science

F. Portella, D. Buchaca, J. Roberto Rodrigues, and J L. Berral
Asymmetric HMMs for online ball-bearing health assessments

IEEE Internet of Things Journal

C. Puerto-Santana, C. Bielza, J. Diaz-Rozo, G. Ramirez-Gargallo, F. Mantovani, G. Virumbrales, J. Labarta, and P. Larranaga
Accelerating FFT Using NEC SX-Aurora Vector Engine

P. Vizcaino, F. Mantovani, and J. Labarta
Multiannual assessment of the desert dust impact on air quality in Italy combining PM10 data with physics-based and geostatistical models

Environment International

F. Barnaba, N. Alvan Romero, A. Bolignano, S. Basart, M. Renzi, and M. Stafoggia

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