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2024

Quest for Orthologs in the Era of Biodiversity Genomics

Genome Biology and Evolution

F. Langschied, N. Bordin, S. Cosentino, D. Fuentes-Palacios, N. Glover, M. Hiller, Y. Hu, J. Huerta-Cepas, L. Pedro Coelho, W. Iwasaki, S. Majidian, S. Manzano-Morales, E. Persson, T. A. Richards, T. Gabaldón, E. Sonnhammer, P. D. Thomas, C. Dessimoz, and I. Ebersberger
The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics

npj Biodiversity

A. M. McCartney, G. Formenti, A. Mouton, D. De Panis, L. S. Marins, H. G. Leitão, G. Diedericks, J. Kirangwa, M. Morselli, J. Salces-Ortiz, et al.
Editorial overview: emerging avenues in antimicrobial research

Current Opinion in Microbiology

T. Gabaldón, and L. Pedro Sór de Carvalho
Long-term stability of acquired drug resistance and resistance associated mutations in the fungal pathogen Nakaseomyces glabratus (Candida glabrata)

Frontiers in Cellular and Infection Microbiology

E. Ksiezopolska, M. Àngel Schikora-Tamarit, J. Carlos Nunez-Rodriguez, and T. Gabaldón
Comparison between 16S rRNA and shotgun sequencing in colorectal cancer, advanced colorectal lesions, and healthy human gut microbiota

BMC Genomics

D. Bars-Cortina, E. Ramon, B. Rius-Sansalvador, E. Guinó, A. Garcia-Serrano, N. Mach, O. Khannous-Lleiffe, E. Saus, T. Gabaldón, G. Ibáñez-Sanz, L. Rodríguez-Alonso, A. Mata, A. García-Rodríguez, M. Obón-Santacana, and V. Moreno
Symmetric and asymmetric DNA N6-adenine methylation regulates different biological responses in Mucorales

Nature Communications

C. Lax, S. J. Mondo, M. Osorio-Concepción, A. Muszewska, M. Corrochano-Luque, G. Gutiérrez, R. Riley, A. Lipzen, J. Guo, H. Hundley, M. Amirebrahimi, V. Ng, D. Lorenzo-Gutiérrez, U. Binder, J. Yang, Y. Song, D. Cánovas, E. Navarro, M. Freitag, T. Gabaldón, I. V. Grigoriev, L. M. Corrochano, F. E. Nicolás, and V. Garre
The Catalan initiative for the Earth BioGenome Project: contributing local data to global biodiversity genomics

NAR Genomics and Bioinformatics

M. Corominas, T. Marques-Bonet, M. A. Arnedo, M. Bayés, J. Belmonte, H. Escrivà, R. Fernández, T. Gabaldón, T. Garnatje, J. Germain, M. Niell, F. Palero, J. Pons, P. Puigdomènech, L. Aguilera, F. Cámara, J. Gómez-Garrido, F. Cruz, I. Sánchez-Escudero, C. R. Altaba, R. Alves, E. Arboleda, M. Capa, L. Triginer, V. Arbona, C. Avila, L. Baldo, A. Enguidanos, A. Prófumo, O. S. Wangesteen, M. Barceló-Serra, L. Botigué, A. Monfort, B. Burriel-Carranza, S. Carranza, J. del Campo, G. Mochales-Riaño, M. Palmada-Flores, H. Candela, C. Cañestro, C. Carreras, M. Domènech, C. Galià-Camps, S. Guirao-Rico, J. Lozano-Fernández, M. Pascual, C. Pegueroles, A. Sánchez-Gracia, M. A. Carretero, O. Grau, R. Garrido, X. Grau-Bové, T. Hermoso, I. Kim, J. A. Jurado-Rivera, C. Lalueza-Fox, J-B. Ledoux, R. Logares, R. Massana, F. Piferrer, J. Mauri, F. Mesquita-Joanes, J. S. Monrós, J. Pellicer, J. Peñuelas, C. Roquet, A. Ruiz-Herrera, G. Torruella, X. Turón, M. Ventura, V. Arroyo, C. Cuevas-Caballé, J. Ferrer Obiol, I. Gut, M. Gut, O. Hidalgo, G. Izquierdo-Arànega, L. Pérez-Sorribes, E. Righi, M. Riutort, J. Vallès, J. Rozas, T. Alioto, and R. Guigó
The Effect of Dietary Nitrate on the Oral Microbiome and Salivary Biomarkers in Individuals with High Blood Pressure

The Journal of Nutrition

L. duToit, M. L. Sundqvist, A. Redondo-Rio, Z. Brookes, P. Casas-Agustench, M. Hickson, A. Benavente, G. Montagut, E. Weitzberg, T. Gabaldón, J. O. Lundberg, and R. Bescos
Assessing Diagnosis of Candida Infections: A Study on Species Prevalence and Antifungal Resistance in Northern Morocco

Journal of Fungi

I. Ahaik, J. Carlos Nunez-Rodriguez, J. Abrini, S. Bouhdid, and T. Gabaldón
Proof of Concept Study: Comparability of Microbiome Diversity in Self- and Physician-Collected HPV-Positive and HPV-Negative Cervicovaginal Samples

International Journal of Molecular Sciences

L. Asensio-Puig, Á. de Andrés-Pablo, O. Khannous-Lleiffe, R. Ibáñez, A. Acera, S. de Sanjosé, T. Gabaldón, L. Alemany, L. Bruni, and M. Àngel Pavón

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