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2023

Lecture Notes in Computer ScienceExperimental IR Meets Multilinguality, Multimodality, and InteractionOverview of BioASQ 2023: The Eleventh BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering

A. Nentidis, G. Katsimpras, A. Krithara, S. Lima López, E. Farre-Maduell, L. Gasco, M. Krallinger, and G. Paliouras
Redefining biomaterial biocompatibility: challenges for artificial intelligence and text mining

Trends in Biotechnology

M. Mateu-Sanz, C. V. Fuenteslópez, J. Uribe-Gomez, H. Jostein Haugen, A. Pandit, M-P. Ginebra, O. Hakimi, M. Krallinger, and A. Samara
An Integrated Workflow to Study the Promoter-Centric Spatio-Temporal Genome Architecture in Scarce Cell Populations

Journal of Visualized Experiments

L. Rovirosa, L. Tomas-Daza, B. Urmeneta, A. Valencia, and B. M. Javierre
Engaging European society at the forefront of cancer research and care

Molecular Oncology

M. Baumann, J. Celis, U. Ringborg, M. Heitor, A. Berns, T. Albreht, J. Arabadjiev, M. Boutros, M. Brandenburg, H. Canhao, F. Carneiro, C. Chomienne, F. De Lorenzo, A. M. M. Eggermont, A. Font, E. Garralda, M. Goulart, R. Henrique, M. Lawler, L. Maier‐Hein, F. Meunier, S. Oberst, P. Oliveira, M. Papatriantafyllou, J. Schüz, E. Solary, A. Valencia, R. Vargas, E. Weiderpass, and N. Wilking
Lessons Learned from a Performance Analysis and Optimization of a Multiscale Cellular Simulation

PASC '23: Platform for Advanced Scientific Computing ConferenceProceedings of the Platform for Advanced Scientific Computing Conference

A. Huebl, C. Silvano, T. Robinson, M. Clascà, M. Garcia-Gasulla, A. Montagud, J. Carbonell Caballero, and A. Valencia
eTRANSAFE: data science to empower translational safety assessment

Nature Reviews Drug Discovery

F. Sanz, F. Pognan, T. Steger-Hartmann, C. Díaz, S. Asakura, A. Amberg, N. Bécourt-Lhote, N. Blomberg, N. Bosc, K. Briggs, F. Bringezu, C. Brulle-Wohlhueter, S. Brunak, R. Bueters, G. Callegaro, S. Capella-Gutierrez, E. Centeno, J. Corvi, M. T. D. Cronin, P. Drew, G. Duchateau-Nguyen, G. F. Ecker, S. Escher, E. Felix, M. Ferreiro, M. Frericks, L. I. Furlong, R. Geiger, C. George, M. Grandits, D. Ivanov-Draganov, J. Kilgour-Christie, T. Kiziloren, J. A. Kors, N. Koyama, A. Kreuchwig, A. R. Leach, M-A. Mayer, P. Monecke, W. Muster, C. Miyamoto Nakazawa, G. Nicholson, R. Parry, M. Pastor, J. Piñero, N. Oberhauser, J. Manuel Ramírez-Anguita, A. Rodrigo, A. Smajic, M. Schaefer, S. Schieferdecker, I. Soininen, E. Terricabras, P. Trairatphisan, S. C. Turner, A. Valencia, B. van de Water, J. L. van der Lei, E. M. van Mulligen, E. Vock, and D. Wilkinson
Molecular bases of comorbidities: present and future perspectives

Trends in Genetics

J. Sánchez-Valle, and A. Valencia
Low input capture Hi-C (liCHi-C) identifies promoter-enhancer interactions at high-resolution

Nature Communications

L. Tomas-Daza, L. Rovirosa, P. López-Martí, A. Nieto-Aliseda, F. Serra, A. Planas-Riverola, O. Molina, R. McDonald, C. Ghevaert, E. Cuatrecasas, D. Costa, M. Camós, C. Bueno, P. Menéndez, A. Valencia, and B. M. Javierre
Quantum digital simulation of the Fermi-Hubbard model under a uniform electric field

J. Triadú iGalí
DEBBIE: The Open Access Database of Experimental Scaffolds and Biomaterials Built Using an Automated Text Mining Pipeline

Advanced Healthcare Materials

J. O. Corvi, A. McKitrick, J. M. Fernández, C. V. Fuenteslópez, J. L. Gelpí, M‐P. Ginebra, S. Capella‐Gutierrez, and O. Hakimi

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