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2022

BioExcel Building Blocks Workflows (BioBB-Wfs), an integrated web-based platform for biomolecular simulations

Nucleic Acids Research

G. Bayarri, P. Andrio, A. Hospital, M. Orozco, and J. Lluis Gelpí
GCAT|Panel, a comprehensive structural variant haplotype map of the Iberian population from high-coverage whole-genome sequencing

Nucleic Acids Research

J. Valls-Margarit, I. Galván-Femenía, D. Matías-Sánchez, N. Blay, M. Puiggròs, A. Carreras, C. Salvoro, B. Cortés, R. Amela, X. Farre, J. Lerga-Jaso, M. Puig, J. Francisco Sánchez-Herrero, V. Moreno, M. Perucho, L. Sumoy, L. Armengol, O. Delaneau, M. Cáceres, R. de Cid, and D. Torrents
GCAT|Panel, a comprehensive structural variant haplotype map of the Iberian population from high-coverage whole-genome sequencing

Nucleic Acids Research

J. Valls-Margarit, I. Galván-Femenía, D. Matías-Sánchez, N. Blay, M. Puiggròs, A. Carreras, C. Salvoro, B. Cortés, R. Amela, X. Farre, J. Lerga-Jaso, M. Puig, J. Francisco Sánchez-Herrero, V. Moreno, M. Perucho, L. Sumoy, L. Armengol, O. Delaneau, M. Cáceres, R. de Cid, and D. Torrents
Clustering and graph mining techniques for classification of complex structural variations in cancer genomes

Scientific Reports

G. Gomez-Sanchez, L. Delgado-Serrano, D. Carrera, D. Torrents, and J L. Berral
Chromosome-level assembly, annotation and phylome of Pelobates cultripes, the western spadefoot toad

DNA Research

H. ChristophLiedtke, F. Cruz, J. Gómez-Garrido, D. Fuentes Palacios, M. Marcet-Houben, M. Gut, T. Alioto, T. Gabaldón, and I. Gomez-Mestre
Using genomics to understand the mechanisms of virulence and drug resistance in fungal pathogens

Biochemical Society Transactions

M. ÀngelSchikora-Tamarit, and T. Gabaldón
Evolutionary analyses of genes in Echinodermata offer insights towards the origin of metazoan phyla

Genomics

S. Foley, A. Vlasova, M. Marcet-Houben, T. Gabaldón, and V. F. Hinman
Secondary structure prediction of long noncoding RNA: review and experimental comparison of existing approaches

Briefings in Bioinformatics

L. A. Bugnon, A. A. Edera, S. Prochetto, M. Gerard, J. Raad, E. Fenoy, M. Rubiolo, U. Chorostecki, T. Gabaldón, F. Ariel, L. E. Di Persia, D. H. Milone, and G. Stegmayer
Patterns of Genomic Variation in the Opportunistic Pathogen Candida glabrata Suggest the Existence of Mating and a Secondary Association with Humans

Current Biology

L. Carreté, E. Ksiezopolska, C. Pegueroles, E. Gómez-Molero, E. Saus, S. Iraola-Guzmán, D. Loska, O. Bader, C. Fairhead, and T. Gabaldón
Citizen-science reveals changes in the oral microbiome in Spain through age and lifestyle factors

npj Biofilms and Microbiomes

J. R. Willis, E. Saus, S. Iraola-Guzmán, E. Ksiezopolska, L. Cozzuto, L. A. Bejarano, N. Andreu-Somavilla, M. Alloza-Trabado, A. Blanco, A. Puig-Sola, E. Broglio, C. Carolis, J. Ponomarenko, J. Hecht, and T. Gabaldón

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