Martin Krallinger

2022

• Overview of the COVID-19 text mining tool interactive demonstration track in BioCreative VIIAbstract

  Database

  A. Chatr-aryamontri, L. Hirschman, K. E. Ross, R. Oughtred, M. Krallinger, K. Dolinski, M. Tyers, T. Korves, and C. N. Arighi
• ExTRI: Extraction of transcription regulation interactions from literature

  Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms

  M. Vazquez, M. Krallinger, F. Leitner, M. Kuiper, A. Valencia, and A. Laegreid
• Lecture Notes in Computer ScienceAdvances in Information RetrievalBioASQ at CLEF2022: The Tenth Edition of the Large-scale Biomedical Semantic Indexing and Question Answering Challenge

  A. Nentidis, A. Krithara, G. Paliouras, L. Gasco, and M. Krallinger

2021

• Lecture Notes in Computer ScienceAdvances in Information RetrievalBioASQ at CLEF2021: Large-Scale Biomedical Semantic Indexing and Question Answering

  A. Krithara, A. Nentidis, G. Paliouras, M. Krallinger, and A. Miranda
• Lecture Notes in Computer ScienceExperimental IR Meets Multilinguality, Multimodality, and InteractionOverview of BioASQ 2021: The Ninth BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering

  A. Nentidis, G. Katsimpras, E. Vandorou, A. Krithara, L. Gasco, M. Krallinger, and G. Paliouras
• Spanish biomedical crawled corpus: A large, diverse dataset for spanish biomedical language models

  arXiv preprint arXiv:2109.07765

  C. PioCarrino, J. Armengol-Estapé, O. de Gibert Bonet, A. Gutiérrez-Fandiño, A. Gonzalez-Agirre, M. Krallinger, and M. Villegas
• Lecture Notes in Computer ScienceExperimental IR Meets Multilinguality, Multimodality, and InteractionOverview of BioASQ 2021: The Ninth BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering

  A. Nentidis, G. Katsimpras, E. Vandorou, A. Krithara, L. Gasco, M. Krallinger, and G. Paliouras
• Lecture Notes in Computer ScienceAdvances in Information RetrievalBioASQ at CLEF2021: Large-Scale Biomedical Semantic Indexing and Question Answering

  A. Krithara, A. Nentidis, G. Paliouras, M. Krallinger, and A. Miranda

2020

• Corpora as Evolving Entities: Embedding Corpora in Biomedical Ontologies

  ICBO/ODLS

  E. T. Hobbs, S. M. Goralski, A. Mitchell, A. Simpson, D. Leka, E. Kotey, M. Sekira, J. B. Munro, S. Nadendla, R. Jackso, A. Gonzalez-Agirre, M. Krallinger, M. G. Giglio, and I. Erill
• Mining stroke discharge reports: a new text mining tool developed by the ICTUSnet network

  International Journal of Stroke

  S. Barzegar, A. Gonzalez-Agirre, A. Moreno-Rojas, C. Jiménez, E. Martínez, M. Krallinger, M. Villegas, and R. Maria Vivanco-Hidalgo