Publications

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2011

Nucleotide binding switches the information flow in ras GTPases.

PLoS computational biology

F. Raimondi, G. Portella, M. Orozco, and F. Fanelli
Molecular basis of substrate-induced permeation by an amino acid antiporter.

Proceedings of the National Academy of Sciences of the United States of America

L. Kowalczyk, M. Ratera, A. Paladino, P. Bartoccioni, E. Errasti-Murugarren, E. Valencia, G. Portella, S. Bial, A. Zorzano, I. Fita, M. Orozco, X. Carpena, J L. Vázquez-Ibar, and M. Palacín
Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia.

Nature

X. S. Puente, M. Pinyol, V. Quesada, L. Conde, G. R. Ordóñez, N. Villamor, G. Escaramis, P. Jares, S. Beà, M. González-Díaz, L. Bassaganyas, T. Baumann, M. Juan, M. López-Guerra, D. Colomer, J. M. C. Tubío, C. López, A. Navarro, C. Tornador, M. Aymerich, M. Rozman, J. M. Hernández, D. A. Puente, J. M. P. Freije, G. Velasco, A. Gutiérrez-Fernández, D. Costa, A. Carrió, S. Guijarro, A. Enjuanes, L. Hernández, J. Yagüe, P. Nicolás, C. M. Romeo-Casabona, H. Himmelbauer, E. Castillo, J. C. Dohm, S. de Sanjosé, M. A. Piris, E. de Alava, J. San Miguel, R. Royo, J L. Gelpí, D. Torrents, M. Orozco, D. G. Pisano, A. Valencia, R. Guigó, M. Bayés, S. Heath, M. Gut, P. Klatt, J. Marshall, K. Raine, L. A. Stebbings, A. P. Futreal, M. R. Stratton, P. J. Campbell, I. Gut, A. López-Guillermo, X. Estivill, E. Montserrat, C. López-Otín, and E. Campo
A systematic study of the energetics involved in structural changes upon association and connectivity in protein interaction networks.

Structure (London, England : 1993)

A. Stein, M. Rueda, A. Panjkovich, M. Orozco, and P. Aloy
nucleR: a package for non-parametric nucleosome positioning.

Bioinformatics (Oxford, England)

O. Flores, and M. Orozco
The native ensemble and folding of a protein molten-globule: functional consequence of downhill folding.

Journal of the American Chemical Society

A. N. Naganathan, and M. Orozco
The protein folding transition-state ensemble from a Gō-like model.

Physical chemistry chemical physics : PCCP

A. N. Naganathan, and M. Orozco
Structural, dynamical, and electronic transport properties of modified DNA duplexes containing size-expanded nucleobases.

The journal of physical chemistry. A

J R. Blas, O. Huertas, C. Tabares, B. G. Sumpter, M. Fuentes-Cabrera, M. Orozco, P. Ordejón, and F J. Luque
Coarse-grained representation of protein flexibility. Foundations, successes, and shortcomings.

Advances in protein chemistry and structural biology

M. Orozco, L. Orellana, A. Hospital, A. N. Naganathan, A. Emperador, O. Carrillo, and J L. Gelpí
Physical properties of naked DNA influence nucleosome positioning and correlate with transcription start and termination sites in yeast.

BMC genomics

O. Deniz, O. Flores, F. Battistini, A. Pérez, M. Soler-López, and M. Orozco

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